| EST name | EST sequence |
| gi|56918423|gb|CK642760.1|CK642760 | CAAGAGAGTGTGAGGAAGGTTTGGACTCTCTGTAAAATGCCCTTTTGGCAAACTAACAATGCCACAGCTTCTTCTTCCTC CTCTTCCTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCACCTGCACATCTT CTAGCTCTATGAGTAGTAATAATAGTATCACTGGCAGTAATGCTTGCCAGCAGAGCCAGACTCATCAGCCAGGAGGAGCA GAGAGATCGACTGTTACTGCGGTGTCTCTTGTTGCCAAGTCTCTTTTGCCAACTAGAAGAAGACTTAGGCTTGATCCTCC TAACAAGCTCTATTTTCCTTATGAACCTGGTAAACAGGTGAGAAGTGCTATTGGCATAAAAAACATTTCTAAATCTCATG CGGCTTTCAAGTTCCAAACAACTGCACCAAAGAGTTGTTACATGAGACCTCCTGGAAGGATACTTGCTCCAGGTGAAAGT CTTATAGCTACTGTGTTCAAGTTTGTGGAGC |
Most similar to sp|Q8VYN2|VAP42_ARATH
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q94A20|BI1L_ARATH BI1-like protein OS=Arabidopsis thaliana
GN=At4g15470 PE=2 SV=1
Length = 256
Score = 202 bits (515), Expect(2) = 4e-63
Identities = 102/161 (63%), Positives = 120/161 (74%)
Frame = +3
Query: 333 FILMIPLYIYQHRHPHNLAILGLFTLCLSFSIGVACANTEGTIXXXXXXXXXXXXXXXXX 512
FIL+ PL+IY +HP NL +L LFT+ LSF++GV+CA TEG I
Sbjct: 96 FILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTA 155
Query: 513 YTFWAAKKGKEFSYLGPFLXSALTILVVISFTQIFFPFGPASNSVIGGFGALVFSGFIVY 692
YTFWAAKKGK+FS+LGP L ++L ILVV SF Q+FFP GP S +V GGF ALVF G+IVY
Sbjct: 156 YTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVY 215
Query: 693 DTENLIKRHTYDEYIWASVELYLDILNLFLTILQMLRQNDN 815
DT+NLIKR TYDEYI ASV LYLDILNLFLTIL++LRQ DN
Sbjct: 216 DTDNLIKRFTYDEYILASVALYLDILNLFLTILRILRQGDN 256
Score = 60.8 bits (146), Expect(2) = 4e-63
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 104 AGGRTSDFERPPGQVGA--GTGELENALRWGFIRKVYGILCAQLVLTTVVSAITVFHPTL 277
+ G+ D E G+ G EN LRWGFIRKVYGIL AQL+LTT++SA+ V +P +
Sbjct: 18 SAGKDIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPV 77
Query: 278 NATLS 292
N L+
Sbjct: 78 NDLLT 82
>sp|O74888|YQE4_SCHPO Uncharacterized membrane protein C576.04
OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972)
GN=SPCC576.04 PE=2 SV=1
Length = 266
Score = 86.7 bits (213), Expect(2) = 4e-21
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Frame = +3
Query: 336 ILMIPLYIYQHRHPHNLAILGLFTLCLSFSIGVACANTEGTIXXXXXXXXXXXXXXXXXY 515
+++ L + + +P N L LFT ++G A I +
Sbjct: 106 VVLFGLIMKPYSYPRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAF 165
Query: 516 TFWAAKKGKEFSYLGPFLXSALTILVVISFTQIFFPFGPASNSVIGGFGALVFSGFIVYD 695
TF + +FS LG FL +L L++ F P P + GFG LVF G+I++D
Sbjct: 166 TF---QSKWDFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFD 222
Query: 696 TENLIKRHTYDEYIWASVELYLDILNLFLTILQ---MLRQNDN 815
T N++ R++ +E+I +S+ LYLD +NLF+ ILQ ML+ NDN
Sbjct: 223 TYNILHRYSPEEFIMSSLMLYLDFINLFIRILQILGMLQNNDN 265
Score = 36.2 bits (82), Expect(2) = 4e-21
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 164 ELENALRWGFIRKVYGILCAQLVLTTVVSAITVFHPTLN 280
E ++R F+RKVY IL AQL +T++ I HP +
Sbjct: 49 ECAKSIRMAFLRKVYAILTAQLFVTSLFGGIFYLHPAFS 87
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis
thaliana GN=PVA42 PE=1 SV=1
Length = 295
Score = 120 bits (302), Expect = 3e-27
Identities = 61/84 (72%), Positives = 65/84 (77%)
Frame = +1
Query: 259 AVSLVAKSXXXXXXXXXXXXXNKLYFPYEPGKQVRSAIGIKNISKSHAAFKFQTTAPKSC 438
+VS VAKS KLYFPYEPGKQVRSAI IKN SKSH AFKFQTTAPKSC
Sbjct: 93 SVSSVAKSFLPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSC 152
Query: 439 YMRPPGRILAPGESLIATVFKFVE 510
+MRPPG ILAPGE++IATVFKFVE
Sbjct: 153 FMRPPGAILAPGETIIATVFKFVE 176